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Bombay High Court — “Tax refund cannot be adjusted against dues settled under amnesty scheme”, refund of ₹33.29 lakh directed

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1. Court’s decision

The Bombay High Court quashed a settlement order issued by the State Tax Department that had adjusted a taxpayer’s refund against alleged dues under the Maharashtra Value Added Tax Act. The Court ruled that such adjustment was impermissible where the taxpayer had already opted for the settlement scheme introduced by the Maharashtra Settlement of Arrears of Tax, Interest, Penalty or Late Fee Act, 2023.

The Court emphasized that the settlement legislation operates as a self-contained code intended to resolve historical tax disputes. Consequently, invoking provisions of the MVAT Act to offset refunds against settled liabilities defeats the purpose of the amnesty scheme.

The Court therefore directed the tax authorities to process the settlement without adjusting the refund and ordered payment of ₹33.29 lakh with statutory interest to the taxpayer.


2. Facts

The petitioner was a proprietorship firm engaged in resale and wholesale trade of paper and paper-based products and registered under the Maharashtra Value Added Tax Act.

Investigations were conducted against the firm for the tax periods 2007–08, 2008–09, and 2009–10 on allegations of ineligible input tax credit claims.

During investigation, the petitioner deposited ₹10 lakh and filed revised returns. Assessment proceedings followed, resulting in partial disallowance of input tax credit and a tax demand.

However, after adjustments and payments, the petitioner became entitled to a refund for the tax period 2007–08. An appellate authority subsequently enhanced the refund amount to ₹33.29 lakh.

Separately, demands were raised for subsequent tax periods. During this time, the State Government introduced an amnesty scheme under the Maharashtra Settlement of Arrears of Tax Act, 2023, allowing settlement of old disputes upon payment of a reduced amount.


3. Issues

The central issue before the High Court was whether the tax authorities could adjust the petitioner’s refund for the tax period 2007–08 against alleged dues for the tax period 2008–09 while determining settlement under the amnesty scheme.

The Court also examined whether the settlement scheme permitted authorities to invoke provisions of the MVAT Act relating to refund adjustment.

Additionally, the Court considered whether the settlement order violated principles of natural justice by being passed without giving the taxpayer an opportunity of hearing.


4. Petitioner’s arguments

The petitioner argued that once it opted for the settlement scheme and paid the requisite amount, there were no outstanding dues for the relevant tax period.

It was submitted that the Settlement Act constituted a complete statutory framework governing settlement of arrears and therefore superseded the operation of refund adjustment provisions under the MVAT Act.

The petitioner further contended that the tax department had failed to issue any defect notice or provide an opportunity of hearing before adjusting the refund.

According to the petitioner, the adjustment of the refund was therefore illegal and contrary to both the settlement legislation and the principles of natural justice.


5. Respondent’s arguments

The State tax authorities argued that the refund for the earlier tax period had to be adjusted against subsequent demands under the MVAT Act.

According to the department, the statutory framework required that excess payments be first applied toward recovery of outstanding dues before being refunded.

The authorities also contended that the petitioner had acknowledged the existence of arrears by applying for settlement under the scheme.

On this basis, the department maintained that adjustment of the refund against subsequent demands was lawful.


6. Analysis of the law

The Court analyzed the scheme and purpose of the Maharashtra Settlement of Arrears of Tax Act, 2023.

It observed that the legislation was enacted to resolve pending tax disputes and unlock revenue stuck in litigation. The statute provides for settlement of arrears through payment of a prescribed percentage of outstanding dues.

Under the scheme, where outstanding dues are below ₹50 lakh, taxpayers may settle liabilities by paying 20% of the dues, with the remaining 80% waived.

The Court noted that the Act sets out a complete mechanism for determining the amount payable and issuing settlement orders.


7. Precedent analysis

The Court relied on earlier decisions of the Bombay High Court interpreting settlement schemes and refund adjustments.

In previous rulings, the Court had held that authorities administering a settlement scheme cannot simultaneously invoke provisions of other statutes to alter settlement calculations.

These precedents emphasized that settlement legislation must be interpreted independently to preserve the scheme’s objective of resolving disputes and providing certainty to taxpayers.

The Court therefore applied these principles to the present dispute.


8. Court’s reasoning

The High Court held that the settlement legislation functions as a self-contained code governing settlement of tax arrears.

The Court noted that the scheme requires determination of arrears separately for each tax year. It does not permit adjustment of refunds relating to another year while computing settlement liability.

The Court further observed that the tax authorities had not issued any formal refund adjustment order under the MVAT Act before passing the impugned settlement order.

It concluded that importing refund adjustment provisions from the MVAT Act into the settlement scheme was legally impermissible.

Additionally, the Court found that the impugned order was passed without granting the petitioner an opportunity of hearing, thereby violating principles of natural justice.


9. Conclusion

The Court held that the impugned settlement order had been passed on an incorrect interpretation of both the MVAT Act and the Settlement Act.

It ruled that the tax department could not adjust the petitioner’s refund against settlement dues and therefore quashed the settlement order dated 18 April 2024.

The Court directed the authorities to accept the settlement application without adjusting the refund and to release ₹33.29 lakh along with applicable interest.


10. Implications

The ruling clarifies that tax amnesty schemes must be implemented strictly in accordance with their statutory framework.

Authorities cannot invoke provisions of other tax laws to alter settlement calculations or deny refunds once a taxpayer has complied with the settlement scheme.

The judgment reinforces judicial protection for taxpayers participating in dispute resolution schemes and ensures that government amnesty initiatives operate in a predictable and taxpayer-friendly manner.


Case Law References

1. TML Business Services Ltd. v. Deputy Commissioner of Sales Tax

The Bombay High Court held that authorities cannot adjust refunds against tax dues where settlement under an amnesty scheme has already been completed.

2. Andreas Stihl Pvt. Ltd. v. Joint Commissioner of State Tax

The Court ruled that authorities administering a settlement scheme cannot import powers from the MVAT Act to recalculate liabilities under the scheme.

3. Evergreen Apartment Cooperative Housing Society Ltd. v. Special Secretary (Appeals)

The Gujarat High Court held that officials exercising powers under different statutes must act strictly within the authority conferred by each statute.


FAQs

1. Can tax authorities adjust refunds against dues settled under an amnesty scheme?

No. The Bombay High Court has held that once a taxpayer settles liabilities under a statutory settlement scheme, authorities cannot adjust refunds from other tax periods against those settled dues.

2. What is the Maharashtra Settlement of Arrears of Tax Act, 2023?

It is an amnesty scheme introduced by the Maharashtra government to settle old tax disputes by allowing taxpayers to pay a reduced portion of outstanding dues while receiving waiver of the balance.

3. Why did the court set aside the tax department’s settlement order?

The Court found that the authorities wrongly invoked refund adjustment provisions of the MVAT Act while implementing the settlement scheme and also failed to provide the taxpayer a hearing.

Also Read: Bombay High Court: Developer cannot invoke arbitration against dissenting society member who never signed redevelopment agreement — “Section 11 application dismissed”

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